actually...no. It's not really supercharged. The blower is better called a scavenge blower. There probably is a small place in the run cycle where the exhaust is closed and the intake is still open, but if it's like the old two-stroke diesels I've seen, you're talking about less than 10 PSI of boost, probably less than five. Roots blowers are horribly inefficient as compressors for all that they're good pumps...
As to where the blower is - it should be on the opposite side of the engine where we never see... Anybody got engineering drawings of one of these things? I've seen plenty of the bigger DD engines, but when they get this little...jeez, the blower must be the size of a toaster.